Links

Molecular Visualization

• Protein Explorer
Eric Martz's popular internet based frontend for molecular visualization
• Molecular Modeling for Organic Chemistry
Henry Rezpa's useful course in molecular modeling in organic chemistry
• WebMO
Unique internet based quantum mechanical calculation and molecular modeling program
• Journal of Molecular Modeling
Scholarly journal of research and advances in the field of molecular modeling

Molecular Modeling Programs

• PyMol
The current standard in creating molecular images and movies
• Jmol
The open source Java based molecular graphics replacement for Chime and Rasmol
• UCSF Chimera
Research strength molecular modeling and visualization program from the computer graphics laboratory at UC San Francisco
• Ribbons
Flexible and multi-featured molecular visualization and animation program
• RasMol
Original molecular visualization program for everyone
• MolScript
Legacy program for generating molecular images in raster and vector formats